|
What do the colours on the pathway heatmaps represent?
|
|
0
|
6
|
June 9, 2022
|
|
Which gene set libraries are available for pathway BMD analysis?
|
|
0
|
4
|
June 9, 2022
|
|
Should I change the filters for the enrichment analysis results?
|
|
0
|
4
|
June 9, 2022
|
|
How is the gene set analysis done?
|
|
0
|
3
|
June 9, 2022
|
|
How are pathway BMDs (pathBMDs) calculated?
|
|
0
|
4
|
June 9, 2022
|
|
What is a transcriptomic POD (tPOD) and how is it calculated?
|
|
0
|
3
|
June 9, 2022
|
|
Why are there some genes with model fits but no BMDs?
|
|
0
|
3
|
June 9, 2022
|
|
How are the BMDl and BMDu calculated for each gene?
|
|
0
|
3
|
June 9, 2022
|
|
What is the BMR factor?
|
|
0
|
3
|
June 9, 2022
|
|
How is the best fit model selected for each gene?
|
|
0
|
3
|
June 9, 2022
|
|
What is a lack-of-fit p-value and which threshold should I choose?
|
|
0
|
3
|
June 9, 2022
|
|
Which statistical models should I select?
|
|
0
|
3
|
June 9, 2022
|
|
Where do the statistical models come from and what are their exact equations?
|
|
0
|
3
|
June 9, 2022
|
|
How are gene-level benchmark doses (BMDs) calculated?
|
|
0
|
3
|
June 9, 2022
|
|
How do I detect and deal with potential outliers?
|
|
0
|
4
|
June 9, 2022
|
|
What are the different types of normalization?
|
|
0
|
9
|
June 9, 2022
|
|
How should I choose a suitable normalization procedure for my data?
|
|
0
|
3
|
June 9, 2022
|
|
What is the rationale behind filtering gene expression data in FastBMD?
|
|
0
|
4
|
June 9, 2022
|
|
What does gene-level summarization mean in FastBMD?
|
|
0
|
4
|
June 9, 2022
|
|
What if my microarray platform or organism is not supported?
|
|
0
|
4
|
June 9, 2022
|
|
How to format a gene expression table?
|
|
0
|
4
|
June 9, 2022
|
|
How to label a gene expression table in FastBMD?
|
|
0
|
3
|
June 9, 2022
|
|
What is the minimum number of concentrations required for dose-response analysis?
|
|
0
|
3
|
June 9, 2022
|
|
Is the data that I uploaded kept confidential?
|
|
0
|
4
|
June 9, 2022
|
|
What types of data does FastBMD accept?
|
|
0
|
8
|
June 1, 2022
|
